- Predicted Gene MLOC_19475
MLOC_19475 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 389.05 | 349.243 | 410.635 | 367.44 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 49.2369 | 28.7845 | 27.6374 | 28.5302 |
| INF1 | Young developing inflorescences (5mm) | 11.3407 | 10.8747 | 21.2067 | 12.7016 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.33813 | 2.98807 | 5.81974 | 4.23711 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 126.078 | 76.6554 | 93.0613 | 91.9723 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 129.108 | 47.1875 | 29.2188 | 107.457 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.16431 | 6.6811 | 6.96939 | 6.94426 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.35992 | 1.20434 | 1.40247 | 3.25974 |
CDS Structure of MLOC_19475
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19475.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g38710.1 |
-3 |
7e-71 |
228 |
149/234 (64%) |
13110.m03526 protein glutathione S-transferase, putative, expressed |
| TAIR PP10 |
AT1G10370.1 |
-3 |
1e-45 |
161 |
87/189 (46%) |
| Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathione S-transferase family protein | chr1:3397274-3398273 REVERSE LENGTH=227 |
