MLOC_1947 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.1909710.57258.287178.18467
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.6938817.68797.2567618.6037
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_1947






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1947.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1947.1CUST_9797_PI427708080AvailableAvailablecontig_117386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01230.2 +2 3e-65 206 102/132 (77%) 13104.m00027 protein phosphoglycerate mutase, putative, expressed
TAIR PP10 AT1G58280.2 +2 2e-53 176 86/140 (61%) Phosphoglycerate mutase family protein | chr1:21620497-21622468 REVERSE LENGTH=343