MLOC_19456 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.147521.387391.15321.10561
LEAShoots from the seedlings (10 cm shoot stage)2.831382.193712.698161.97562
INF1Young developing inflorescences (5mm)3.310753.989094.414582.79344
INF2Developing inflorescences (1-1.5 cm)5.181054.712945.182024.67914
ROORoots from the seedlings (10 cm shoot stage)0.6952421.663631.655681.49037
NODDeveloping tillers at six leaf stage, 3rd internode0.4735040.8922661.818182.8537
CAR5Developing grain, bracts removed (5 DPA)3.195942.923062.802142.41326
CAR15Developing grain, bracts removed (15 DPA)73.222384.570467.6766148.794



CDS Structure of MLOC_19456






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19456.13
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19456.13NoneAvailableAvailablecontig_158500 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05550.1 +2 2e-140 433 232/334 (69%) 13106.m00542 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT3G16370.1 +2 8e-108 345 178/306 (58%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353