MLOC_19412 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0872588000.139536
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.1207020.02872190.03932060.0703307
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)44.51155.624641.2482104.281



CDS Structure of MLOC_19412






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19412.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19412.1CUST_2818_PI427708083AvailableAvailablecontig_158486 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g41438.1 -2 2e-154 451 255/393 (65%) 13103.m04460 protein serpin domain containing protein, putative, expressed
TAIR PP10 AT1G47710.1 -2 8e-117 353 188/383 (49%) Serine protease inhibitor (SERPIN) family protein | chr1:17558271-17560061 FORWARD LENGTH=391