MLOC_19405 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.350313.276513.245110.5951
LEAShoots from the seedlings (10 cm shoot stage)34.052636.78537.659628.4926
INF1Young developing inflorescences (5mm)29.748323.751621.722918.9372
INF2Developing inflorescences (1-1.5 cm)13.892313.032516.70213.6463
ROORoots from the seedlings (10 cm shoot stage)26.999134.66629.474636.2504
NODDeveloping tillers at six leaf stage, 3rd internode37.194431.347823.226294.5374
CAR5Developing grain, bracts removed (5 DPA)13.41029.5627410.55619.47945
CAR15Developing grain, bracts removed (15 DPA)1.646811.386431.649043.04513



CDS Structure of MLOC_19405






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19405.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250783.1NoneNoneNoneNone
MLOC_19405.1CUST_1845_PI427708080AvailableAvailablecontig_158484 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34270.1 -1 0.0 964 508/604 (84%) 13105.m03563 protein inactive receptor kinase At1g27190 precursor, putative, expressed
TAIR PP10 AT5G48380.1 -1 0.0 664 353/605 (58%) | Symbols: BIR1 | BAK1-interacting receptor-like kinase 1 | chr5:19604584-19606532 REVERSE LENGTH=620