- Predicted Gene MLOC_19368
MLOC_19368 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19368_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19368_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 33.5917 | 66.0788 | 61.009 | 63.0105 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 58.4613 | 65.5715 | 56.1428 | 57.4974 |
INF1 | Young developing inflorescences (5mm) | 76.8648 | 76.0028 | 76.6394 | 68.8713 |
INF2 | Developing inflorescences (1-1.5 cm) | 77.9252 | 95.2157 | 82.8953 | 98.7471 |
ROO | Roots from the seedlings (10 cm shoot stage) | 27.1818 | 59.2405 | 50.4579 | 75.3897 |
NOD | Developing tillers at six leaf stage, 3rd internode | 36.2314 | 40.3085 | 39.2595 | 144.249 |
CAR5 | Developing grain, bracts removed (5 DPA) | 70.9632 | 68.5937 | 71.5437 | 71.8964 |
CAR15 | Developing grain, bracts removed (15 DPA) | 61.5 | 60.581 | 58.2828 | 145.041 |
CDS Structure of MLOC_19368
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19368.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g10620.1 |
+2 |
0.0 |
1352 |
702/760 (92%) |
13106.m01149 protein transcription elongation factor SPT5 homolog 1, putative, expressed |
TAIR PP10 |
AT4G08350.1 |
+2 |
0.0 |
1181 |
634/937 (68%) |
| Symbols: GTA02, GTA2 | global transcription factor group A2 | chr4:5286351-5292072 FORWARD LENGTH=1041 |