MLOC_19364 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4537610.09587450.255920.253119
LEAShoots from the seedlings (10 cm shoot stage)00.52894700.566807
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.1428280.2776810.1708290.254435
ROORoots from the seedlings (10 cm shoot stage)3.807542.797741.569683.10358
NODDeveloping tillers at six leaf stage, 3rd internode0.7185360.1953630.718710.784988
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.7965840.410760.3169371.33356



CDS Structure of MLOC_19364






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19364.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19364.1CUST_2808_PI427708083AvailableAvailablecontig_1584641 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g25780.1 -1 1e-30 115 87/159 (55%) 13102.m02789 protein expressed protein
TAIR PP10 AT2G45360.1 -1 4e-14 68 54/131 (41%) Protein of unknown function (DUF1442) | chr2:18698619-18699360 FORWARD LENGTH=215