MLOC_19356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains99.640676.624280.085978.6783
LEAShoots from the seedlings (10 cm shoot stage)97.821617.157110.424834.8973
INF1Young developing inflorescences (5mm)39.604942.03541.170733.3592
INF2Developing inflorescences (1-1.5 cm)20.499524.886729.352525.5175
ROORoots from the seedlings (10 cm shoot stage)27.556537.980446.653539.8709
NODDeveloping tillers at six leaf stage, 3rd internode144.45999.892415.8141214.069
CAR5Developing grain, bracts removed (5 DPA)42.923248.429956.968746.0342
CAR15Developing grain, bracts removed (15 DPA)1.149140.5548611.250492.25414



CDS Structure of MLOC_19356






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19356.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19356.2CUST_11610_PI427708083AvailableAvailablecontig_1584623 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g33270.1 -3 8e-92 287 135/145 (93%) 13111.m03256 protein glycosyl hydrolases family 16, putative, expressed
TAIR PP10 AT5G13870.1 -3 3e-78 251 118/162 (73%) | Symbols: EXGT-A4, XTH5 | xyloglucan endotransglucosylase/hydrolase 5 | chr5:4475089-4476217 REVERSE LENGTH=293