- Predicted Gene MLOC_19352
MLOC_19352 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.2236 | 2.68732 | 1.39567 | 2.17017 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.34218 | 9.6029 | 10.5352 | 8.42079 |
| INF1 | Young developing inflorescences (5mm) | 1.62251 | 1.48508 | 2.34413 | 1.53986 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.24793 | 2.57918 | 2.96999 | 2.92981 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.39246 | 6.37044 | 4.53994 | 8.04504 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.44269 | 2.84186 | 5.01694 | 12.4019 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.185364 | 0.286613 | 0.239086 | 0.259227 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0893751 | 0.0912828 | 0.176735 | 0.275956 |
CDS Structure of MLOC_19352
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19352.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g21640.2 |
-2 |
1e-124 |
384 |
235/464 (51%) |
13103.m02597 protein expressed protein |
| TAIR PP10 |
AT5G05190.1 |
-2 |
3e-13 |
73 |
72/270 (27%) |
Protein of unknown function (DUF3133) | chr5:1541853-1543875 FORWARD LENGTH=615 |
