- Predicted Gene MLOC_19301
MLOC_19301 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 36.5183 | 34.6335 | 32.7194 | 32.7847 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.8863 | 29.8986 | 35.2991 | 24.5562 |
| INF1 | Young developing inflorescences (5mm) | 19.6211 | 20.7413 | 21.2398 | 15.9597 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.5144 | 18.3429 | 18.3335 | 19.6688 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 46.249 | 42.8728 | 40.0712 | 49.37 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.8548 | 26.3318 | 22.4755 | 83.7403 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.5983 | 29.5995 | 29.0646 | 26.5779 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.4598 | 11.3027 | 12.0155 | 24.458 |
CDS Structure of MLOC_19301
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19301.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g08480.1 |
-3 |
2e-179 |
510 |
279/315 (89%) |
13102.m00981 protein ubiquitin fusion degradation protein, putative, expressed |
| TAIR PP10 |
AT2G21270.2 |
-3 |
2e-141 |
413 |
224/322 (70%) |
| Symbols: UFD1 | ubiquitin fusion degradation 1 | chr2:9108126-9110012 FORWARD LENGTH=319 |