- Predicted Gene MLOC_19195
MLOC_19195 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 102.667 | 154 | 146.248 | 123.367 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 106.372 | 58.1873 | 61.7903 | 61.2723 |
| INF1 | Young developing inflorescences (5mm) | 91.7982 | 88.1256 | 81.4999 | 65.3147 |
| INF2 | Developing inflorescences (1-1.5 cm) | 57.7149 | 68.9412 | 69.2234 | 64.0283 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 61.1108 | 113.019 | 97.5404 | 110.171 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 141.6 | 106.642 | 58.8659 | 309.847 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 101.002 | 103.403 | 103.672 | 89.2881 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 24.6496 | 21.3752 | 20.8408 | 45.4719 |
CDS Structure of MLOC_19195
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19195.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g10150.1 |
-2 |
0.0 |
1538 |
845/889 (95%) |
13107.m01027 protein coatomer subunit gamma-2, putative, expressed |
| TAIR PP10 |
AT4G34450.1 |
-2 |
0.0 |
1316 |
707/870 (81%) |
coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD LENGTH=886 |