MLOC_19178 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1002660.042419100.0751335
LEAShoots from the seedlings (10 cm shoot stage)0.8186410.5538320.4590450.526141
INF1Young developing inflorescences (5mm)00.07976350.0878460.105991
INF2Developing inflorescences (1-1.5 cm)000.1216590.134959
ROORoots from the seedlings (10 cm shoot stage)00.2041411.080740.510514
NODDeveloping tillers at six leaf stage, 3rd internode0.06071770.07386540.2050110.308173
CAR5Developing grain, bracts removed (5 DPA)00.037691100.0538077
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_19178






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19178.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19178.2CUST_9765_PI427708080AvailableAvailablecontig_158382 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44860.1 -3 8e-102 310 163/327 (50%) 13102.m05026 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G55050.1 -3 4e-55 188 115/337 (34%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:22337745-22339741 FORWARD LENGTH=376