- Predicted Gene MLOC_19172
MLOC_19172 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.664519 | 0.747608 | 0.984496 | 0.777737 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.703088 | 0.534569 | 0.663312 | 0.555077 |
| INF1 | Young developing inflorescences (5mm) | 0.329622 | 0.899859 | 0.740664 | 0.536 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.588409 | 0.726284 | 0.40012 | 0.67754 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.39556 | 1.42914 | 1.67037 | 1.75422 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.35364 | 0.398702 | 0.26125 | 1.31843 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.68887 | 0.733995 | 0.667266 | 0.687807 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.469587 | 0.520625 | 0.280226 | 1.03395 |
CDS Structure of MLOC_19172
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19172.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g36700.1 |
-3 |
3e-161 |
483 |
241/289 (83%) |
13106.m03797 protein T-complex protein, putative, expressed |
| TAIR PP10 |
AT1G24510.2 |
-3 |
2e-155 |
464 |
230/289 (80%) |
TCP-1/cpn60 chaperonin family protein | chr1:8685504-8687660 REVERSE LENGTH=459 |