- Predicted Gene MLOC_19160
MLOC_19160 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.07386 | 3.35517 | 4.87588 | 4.24464 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.624724 | 0.666765 | 0.195598 | 0.406013 |
| INF1 | Young developing inflorescences (5mm) | 0.665132 | 0.828728 | 1.2833 | 0.746553 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.47758 | 2.40404 | 3.49494 | 2.81709 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.18791 | 1.04961 | 0.376663 | 1.19189 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.200615 | 0.187527 | 0 | 0.714916 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 393.736 | 435.96 | 338.13 | 361.731 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 76.7598 | 75.6417 | 67.7497 | 162.218 |
CDS Structure of MLOC_19160
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19160.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03810.1 |
-3 |
1e-16 |
74 |
33/61 (54%) |
13103.m00380 protein DEF8 - Defensin and Defensin-like DEFL family, expressed |
| TAIR PP10 |
AT2G02120.1 |
-3 |
2e-15 |
69 |
29/48 (60%) |
| Symbols: PDF2.1, LCR70 | Scorpion toxin-like knottin superfamily protein | chr2:538319-538842 FORWARD LENGTH=77 |