MLOC_19148 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.971412.38923.025592.66311
LEAShoots from the seedlings (10 cm shoot stage)9.450341.521733.146493.70612
INF1Young developing inflorescences (5mm)6.824475.802135.840875.61631
INF2Developing inflorescences (1-1.5 cm)1.651071.563252.851942.24155
ROORoots from the seedlings (10 cm shoot stage)2.28563.60862.688583.55723
NODDeveloping tillers at six leaf stage, 3rd internode4.411245.337931.3038810.4867
CAR5Developing grain, bracts removed (5 DPA)3.564794.409243.909074.16297
CAR15Developing grain, bracts removed (15 DPA)0.05526450.09895560.05939630.204818



CDS Structure of MLOC_19148






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19148.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354952NoneNoneNoneNone
MLOC_19148.1CUST_1827_PI427708080AvailableAvailablecontig_1583680 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52570.1 +3 0.0 754 412/466 (88%) 13103.m05725 protein glycerol-3-phosphate acyltransferase, putative
TAIR PP10 AT2G38110.1 +3 4e-173 510 272/491 (55%) | Symbols: ATGPAT6, GPAT6 | glycerol-3-phosphate acyltransferase 6 | chr2:15952816-15955364 REVERSE LENGTH=501