- Predicted Gene MLOC_19141
MLOC_19141 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 105.215 | 68.2035 | 91.5512 | 76.0632 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 442.582 | 352.257 | 245.58 | 273.296 |
| INF1 | Young developing inflorescences (5mm) | 1.10707 | 0.570475 | 0.615044 | 0.624995 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.89267 | 3.26988 | 4.62241 | 3.37445 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.6914 | 72.0658 | 24.7568 | 56.3278 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 44.8577 | 56.0097 | 14.8892 | 125.883 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 184.44 | 223.872 | 224.59 | 177.971 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.40809 | 3.66908 | 14.8793 | 17.0408 |
CDS Structure of MLOC_19141
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19141.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g24070.1 |
+3 |
5e-27 |
108 |
57/92 (62%) |
13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| TAIR PP10 |
AT5G59310.1 |
+3 |
2e-21 |
92 |
47/89 (53%) |
| Symbols: LTP4 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112 |
