MLOC_19132 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains243.354153.05161.413155.217
LEAShoots from the seedlings (10 cm shoot stage)0.101508000.0944962
INF1Young developing inflorescences (5mm)0.2075610.059492200.120679
INF2Developing inflorescences (1-1.5 cm)0.1014610.050127500.0955847
ROORoots from the seedlings (10 cm shoot stage)312.554222.798277.218220.862
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_19132






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19132.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372008NoneNoneNoneNone
MLOC_19132.1CUST_17959_PI427708080AvailableAvailablecontig_1583622 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40440.1 -2 3e-31 117 71/122 (58%) 13110.m03746 protein LTPL140 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT4G12500.1 -2 2e-24 99 52/88 (59%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:7414369-7414902 REVERSE LENGTH=177