- Predicted Gene MLOC_1912
- Gene IDMLOC_1912
- Source Contig contig_1170319
MLOC_1912 FPKM values
FPKM by Treatment | FPKM by Replicate |
---|---|
There are no FPKM-by-treatment values calculated for this gene. | ![]() |
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|---|---|---|---|---|
EMB | 4-day embryos dissected from germinating grains | 0.93865 | 0.82255 | 2.5904 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.55469 | 0 | 1.22524 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.830325 | 0.814317 | 6.08704 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.3265 | 3.74347 | 9.63085 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.58477 | 2.56493 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.716446 | 5.65603 | 3.58743 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.76451 | 4.80595 | 3.74201 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.812967 | 0 | 0 | 0 |
CDS Structure of MLOC_1912
![](/morexGenes/blast_net_images/MLOC_1912_assembly3_WGSMorex_rbca.fasta_genes.png)
Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK249301.1
Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
---|---|---|---|---|
AK249301.1 | CUST_23254_PI427708080 | None | None | None |
MLOC_13145.1 | None | Available | None | contig_156493 (Mapped) |
MLOC_1912.1 | None | Available | None | contig_1170319 (Not mapped) |
MLOC_2544.1 | None | Available | None | contig_1226734 (Not mapped) |
MLOC_2887.1 | None | Available | None | contig_1257715 (Not mapped) |
MLOC_29047.1 | None | Available | None | contig_1969596 (Not mapped) |
MLOC_30776.1 | None | Available | None | contig_21252 (Not mapped) |
MLOC_33489.1 | None | Available | None | contig_237800 (Not mapped) |
MLOC_35846.1 | None | Available | None | contig_252373 (Mapped) |
MLOC_41311.1 | None | Available | None | contig_2582226 (Not mapped) |
MLOC_42452.1 | None | Available | None | contig_2645397 (Not mapped) |
MLOC_46466.1 | None | Available | None | contig_290832 (Mapped) |
MLOC_47434.1 | None | Available | None | contig_306050 (Mapped) |
MLOC_48547.1 | None | Available | Available | contig_325745 (Not mapped) |
MLOC_59622.1 | None | Available | None | contig_437690 (Mapped) |
MLOC_80103.1 | None | Available | None | contig_886570 (Not mapped) |
MLOC_955.1 | None | Available | None | contig_1079535 (Mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |