MLOC_19118 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains64.502442.914144.895847.016
LEAShoots from the seedlings (10 cm shoot stage)1.559417.408118.37019.8809
INF1Young developing inflorescences (5mm)0.21905600.1977360.17506
INF2Developing inflorescences (1-1.5 cm)0.8474690.2033172.42131.04897
ROORoots from the seedlings (10 cm shoot stage)84.449781.662783.543588.794
NODDeveloping tillers at six leaf stage, 3rd internode2.50610.4543770.1779131.10717
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)1.408181.462580.9776193.28558



CDS Structure of MLOC_19118






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19118.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362967NoneNoneNoneNone
MLOC_19118.1CUST_1825_PI427708080AvailableAvailablecontig_1583544 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g03380.1 +1 2e-34 126 73/165 (44%) 13101.m00289 protein BBTI6 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed
TAIR PP10None-----