- Predicted Gene MLOC_19100
MLOC_19100 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19100_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19100_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.07306 | 7.02978 | 5.04464 | 6.73813 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.05579 | 4.00744 | 4.50061 | 3.89573 |
INF1 | Young developing inflorescences (5mm) | 11.135 | 11.2127 | 12.4567 | 9.94242 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.954 | 13.6446 | 12.6733 | 14.3903 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.64105 | 6.53261 | 5.2036 | 7.49931 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.6927 | 2.7467 | 4.37143 | 9.66451 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.78321 | 8.34357 | 7.35056 | 7.60002 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.28544 | 3.08165 | 2.82658 | 7.43117 |
CDS Structure of MLOC_19100
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19100.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52750.2 |
-3 |
1e-179 |
516 |
247/303 (82%) |
13103.m05753 protein cyclin, putative, expressed |
TAIR PP10 |
AT5G27620.1 |
-3 |
3e-113 |
345 |
166/301 (55%) |
| Symbols: CYCH;1 | cyclin H;1 | chr5:9771762-9774684 FORWARD LENGTH=336 |