MLOC_19099 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9789410.38769.2223910.1513
LEAShoots from the seedlings (10 cm shoot stage)11.57115.533516.00911.2585
INF1Young developing inflorescences (5mm)12.975911.447212.047710.8958
INF2Developing inflorescences (1-1.5 cm)10.075310.058614.455712.6439
ROORoots from the seedlings (10 cm shoot stage)13.351916.809916.997118.3759
NODDeveloping tillers at six leaf stage, 3rd internode12.43299.6653417.914427.9095
CAR5Developing grain, bracts removed (5 DPA)16.337215.97516.570316.4998
CAR15Developing grain, bracts removed (15 DPA)10.88510.188.6813225.3473



CDS Structure of MLOC_19099






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19099.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19099.1CUST_2767_PI427708083AvailableAvailablecontig_158349 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52730.1 +2 2e-53 174 84/94 (89%) 13103.m05751 protein magnesium-dependent phosphatase 1, putative, expressed
TAIR PP10 AT2G14110.1 +2 1e-46 155 71/94 (76%) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:5952005-5953002 FORWARD LENGTH=190