- Predicted Gene MLOC_19084
MLOC_19084 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 166.41 | 151.006 | 133.613 | 148.201 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 79.0314 | 32.5654 | 28.7163 | 37.4057 |
INF1 | Young developing inflorescences (5mm) | 334.225 | 299.733 | 298.832 | 274.09 |
INF2 | Developing inflorescences (1-1.5 cm) | 251.044 | 304.419 | 239.049 | 313.726 |
ROO | Roots from the seedlings (10 cm shoot stage) | 81.7139 | 96.9197 | 149.316 | 111.071 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.54432 | 4.44197 | 5.63192 | 11.2397 |
CAR5 | Developing grain, bracts removed (5 DPA) | 86.5341 | 99.4433 | 85.1526 | 93.2115 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.09445 | 5.57732 | 10.3803 | 18.9511 |
CDS Structure of MLOC_19084
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19084.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 |
AT5G59970.1 |
-2 |
9e-11 |
56 |
27/28 (96%) |
Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103 |