MLOC_19084 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains166.41151.006133.613148.201
LEAShoots from the seedlings (10 cm shoot stage)79.031432.565428.716337.4057
INF1Young developing inflorescences (5mm)334.225299.733298.832274.09
INF2Developing inflorescences (1-1.5 cm)251.044304.419239.049313.726
ROORoots from the seedlings (10 cm shoot stage)81.713996.9197149.316111.071
NODDeveloping tillers at six leaf stage, 3rd internode9.544324.441975.6319211.2397
CAR5Developing grain, bracts removed (5 DPA)86.534199.443385.152693.2115
CAR15Developing grain, bracts removed (15 DPA)9.094455.5773210.380318.9511



CDS Structure of MLOC_19084






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19084.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19084.1CUST_2764_PI427708083AvailableAvailablecontig_1583427 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT5G59970.1 -2 9e-11 56 27/28 (96%) Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103