MLOC_1908 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 52.8408 | 34.6623 | 36.6684 | 27.8159 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.4314 | 14.3518 | 24.6483 | 13.1568 |
INF1 | Young developing inflorescences (5mm) | 66.4611 | 66.9283 | 76.6308 | 35.0903 |
INF2 | Developing inflorescences (1-1.5 cm) | 38.01 | 46.0641 | 53.6592 | 31.9106 |
ROO | Roots from the seedlings (10 cm shoot stage) | 48.959 | 34.6165 | 48.3248 | 28.8086 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.62047 | 7.37032 | 23.6252 | 21.8317 |
CAR5 | Developing grain, bracts removed (5 DPA) | 26.3692 | 28.9894 | 27.1113 | 16.5371 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.0748 | 14.8601 | 14.0175 | 20.8072 |
CDS Structure of MLOC_1908
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1908.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g03450.1 |
-3 |
1e-16 |
79 |
36/36 (100%) |
13108.m00307 protein ribosomal protein L37, putative, expressed |
TAIR PP10 |
AT3G16080.1 |
-3 |
2e-14 |
72 |
32/36 (89%) |
Zinc-binding ribosomal protein family protein | chr3:5454892-5455677 FORWARD LENGTH=95 |