MLOC_1908 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.840834.662336.668427.8159
LEAShoots from the seedlings (10 cm shoot stage)27.431414.351824.648313.1568
INF1Young developing inflorescences (5mm)66.461166.928376.630835.0903
INF2Developing inflorescences (1-1.5 cm)38.0146.064153.659231.9106
ROORoots from the seedlings (10 cm shoot stage)48.95934.616548.324828.8086
NODDeveloping tillers at six leaf stage, 3rd internode8.620477.3703223.625221.8317
CAR5Developing grain, bracts removed (5 DPA)26.369228.989427.111316.5371
CAR15Developing grain, bracts removed (15 DPA)16.074814.860114.017520.8072



CDS Structure of MLOC_1908






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1908.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1908.1CUST_11603_PI427708083AvailableAvailablecontig_117001 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g03450.1 -3 1e-16 79 36/36 (100%) 13108.m00307 protein ribosomal protein L37, putative, expressed
TAIR PP10 AT3G16080.1 -3 2e-14 72 32/36 (89%) Zinc-binding ribosomal protein family protein | chr3:5454892-5455677 FORWARD LENGTH=95