MLOC_19076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.820810.7188410.661330.997628
LEAShoots from the seedlings (10 cm shoot stage)1.728272.467794.086482.52
INF1Young developing inflorescences (5mm)0.4809640.2677050.1601890.26951
INF2Developing inflorescences (1-1.5 cm)00.07179120.1582560.118751
ROORoots from the seedlings (10 cm shoot stage)7.387155.468874.472856.83613
NODDeveloping tillers at six leaf stage, 3rd internode0.6863080.9482350.9660283.27644
CAR5Developing grain, bracts removed (5 DPA)0.3309870.4255560.256360.329376
CAR15Developing grain, bracts removed (15 DPA)0.2469270.5129230.3593150.79389



CDS Structure of MLOC_19076






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19076.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19076.1NoneAvailableAvailablecontig_1583394 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53200.1 -1 3e-75 234 115/131 (88%) 13103.m05808 protein OsCML4 - Calmodulin-related calcium sensor protein, expressed
TAIR PP10 AT5G37780.1 -1 5e-54 179 86/122 (70%) | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 | chr5:15004769-15006117 REVERSE LENGTH=149