MLOC_19070 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.446544.510114.775944.08332
LEAShoots from the seedlings (10 cm shoot stage)3.954092.165172.076342.12915
INF1Young developing inflorescences (5mm)6.958447.15758.471435.16471
INF2Developing inflorescences (1-1.5 cm)7.076047.74286.95326.74628
ROORoots from the seedlings (10 cm shoot stage)3.395234.527642.840274.05374
NODDeveloping tillers at six leaf stage, 3rd internode2.350022.089012.198215.97575
CAR5Developing grain, bracts removed (5 DPA)3.041662.668363.703432.42304
CAR15Developing grain, bracts removed (15 DPA)2.768363.260672.890325.48547



CDS Structure of MLOC_19070






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19070.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19070.1CUST_2762_PI427708083AvailableAvailablecontig_1583381 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01540.1 -3 6e-18 85 46/100 (46%) 13103.m00074 protein DNA binding protein, putative, expressed
TAIR PP10None-----