MLOC_1907 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.06762 | 0.991169 | 0.884965 | 1.01096 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.2781 | 12.8929 | 16.6305 | 9.48872 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0570853 | 0.0360464 | 0.0593561 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.36548 | 5.44922 | 3.20292 | 5.96634 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.856335 | 1.70663 | 4.86648 | 7.06571 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0.071001 | 0.133344 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_1907
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1907.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g43970.1 |
+1 |
7e-173 |
492 |
246/315 (78%) |
13112.m04638 protein hydrolase, alpha/beta fold family domain containing protein, expressed |
| TAIR PP10 |
AT3G51000.1 |
+1 |
7e-110 |
331 |
172/314 (55%) |
alpha/beta-Hydrolases superfamily protein | chr3:18945258-18946499 REVERSE LENGTH=323 |
