MLOC_19030 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5465430.8359060.837860.999064
LEAShoots from the seedlings (10 cm shoot stage)0.8857380.975420.9972250.881802
INF1Young developing inflorescences (5mm)2.848282.440122.012012.54256
INF2Developing inflorescences (1-1.5 cm)0.4270420.5807240.6057680.806062
ROORoots from the seedlings (10 cm shoot stage)11.98685.792367.95759.36062
NODDeveloping tillers at six leaf stage, 3rd internode3.288630.9583842.62053.06791
CAR5Developing grain, bracts removed (5 DPA)2.535612.334391.16742.59576
CAR15Developing grain, bracts removed (15 DPA)3.259653.102362.748779.41281



CDS Structure of MLOC_19030






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19030.1CUST_2757_PI427708083AvailableAvailablecontig_158316 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g02300.1 +1 1e-24 100 91/171 (53%) 13103.m00183 protein expressed protein
TAIR PP10None-----