- Predicted Gene MLOC_19017
MLOC_19017 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.03152 | 7.31196 | 7.01255 | 7.41062 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.27831 | 8.06491 | 6.5379 | 7.42021 |
| INF1 | Young developing inflorescences (5mm) | 12.3549 | 12.875 | 13.5455 | 11.2269 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.1153 | 15.2397 | 14.1647 | 16.5147 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.88984 | 6.85203 | 5.67011 | 9.38877 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.59484 | 6.24831 | 5.65639 | 25.3315 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.7283 | 10.8946 | 12.0304 | 11.4559 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.11267 | 6.40036 | 6.44768 | 15.2703 |
CDS Structure of MLOC_19017
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19017.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g42040.1 |
+3 |
4e-117 |
385 |
266/305 (87%) |
13102.m04647 protein MIF4G domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G39260.1 |
+3 |
2e-48 |
186 |
159/310 (51%) |
binding;RNA binding | chr2:16392288-16399588 REVERSE LENGTH=1181 |