MLOC_19005 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.444811.851853.687032.96719
LEAShoots from the seedlings (10 cm shoot stage)11.68916.850515.758912.0666
INF1Young developing inflorescences (5mm)0.8745371.689870.4323370.979531
INF2Developing inflorescences (1-1.5 cm)0.03930240.113660.1843930.145299
ROORoots from the seedlings (10 cm shoot stage)80.863531.80428.486142.5264
NODDeveloping tillers at six leaf stage, 3rd internode9.864063.3336912.755914.6044
CAR5Developing grain, bracts removed (5 DPA)0.9222631.049630.671220.981906
CAR15Developing grain, bracts removed (15 DPA)1.125261.597461.56143.78429



CDS Structure of MLOC_19005






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19005.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365233NoneNoneNoneNone
MLOC_19005.1CUST_1819_PI427708080AvailableAvailablecontig_1583019 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50710.1 +3 3e-14 69 59/92 (64%) 13102.m05754 protein expressed protein
TAIR PP10None-----