MLOC_1896 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.802530.47355300
LEAShoots from the seedlings (10 cm shoot stage)3.394033.517764.622320
INF1Young developing inflorescences (5mm)2.283253.745442.959580
INF2Developing inflorescences (1-1.5 cm)2.449653.75391.060010
ROORoots from the seedlings (10 cm shoot stage)6.57560.9715844.595870
NODDeveloping tillers at six leaf stage, 3rd internode0.4021261.686711.248860
CAR5Developing grain, bracts removed (5 DPA)1.938333.040012.045280
CAR15Developing grain, bracts removed (15 DPA)0.9554971.023870.7190740



CDS Structure of MLOC_1896






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373887
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373887CUST_25795_PI427708080NoneNoneNone
MLOC_1896.1NoneAvailableNonecontig_1169186 (Not mapped)
MLOC_26260.1NoneAvailableNonecontig_1744408 (Mapped)
MLOC_29508.1NoneAvailableNonecontig_2012068 (Mapped)
MLOC_31516.1NoneAvailableNonecontig_219765 (Mapped)
MLOC_41438.1NoneAvailableNonecontig_2588457 (Mapped)
MLOC_41954.1NoneAvailableNonecontig_2615475 (Not mapped)
MLOC_42260.1NoneAvailableNonecontig_263371 (Not mapped)
MLOC_46900.1NoneAvailableAvailablecontig_297417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----