- Predicted Gene MLOC_18951
MLOC_18951 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18951_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18951_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.72509 | 3.91663 | 3.80705 | 4.02357 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.99284 | 0.225367 | 1.58372 | 1.39441 |
INF1 | Young developing inflorescences (5mm) | 4.62078 | 6.65774 | 8.47404 | 5.45477 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.5225 | 3.8416 | 3.30855 | 3.47291 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.19008 | 3.9086 | 2.92656 | 4.48735 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.245173 | 0.0381016 | 0.853882 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.41976 | 10.3451 | 7.23677 | 8.44777 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.16284 | 2.15714 | 1.83032 | 5.15805 |
CDS Structure of MLOC_18951
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18951.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g72710.1 |
+2 |
1e-70 |
228 |
166/204 (81%) |
13101.m07926 protein expressed protein |
TAIR PP10 |
AT5G12470.1 |
+2 |
6e-53 |
181 |
125/188 (66%) |
Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386 |