MLOC_18951 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.725093.916633.807054.02357
LEAShoots from the seedlings (10 cm shoot stage)2.992840.2253671.583721.39441
INF1Young developing inflorescences (5mm)4.620786.657748.474045.45477
INF2Developing inflorescences (1-1.5 cm)2.52253.84163.308553.47291
ROORoots from the seedlings (10 cm shoot stage)5.190083.90862.926564.48735
NODDeveloping tillers at six leaf stage, 3rd internode00.2451730.03810160.853882
CAR5Developing grain, bracts removed (5 DPA)8.4197610.34517.236778.44777
CAR15Developing grain, bracts removed (15 DPA)2.162842.157141.830325.15805



CDS Structure of MLOC_18951






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18951.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18951.1CUST_2749_PI427708083AvailableAvailablecontig_158282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72710.1 +2 1e-70 228 166/204 (81%) 13101.m07926 protein expressed protein
TAIR PP10 AT5G12470.1 +2 6e-53 181 125/188 (66%) Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386