- Predicted Gene MLOC_18933
MLOC_18933 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.90845 | 4.69568 | 4.92694 | 4.94963 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.93912 | 7.31148 | 10.8025 | 6.95288 |
| INF1 | Young developing inflorescences (5mm) | 7.09337 | 9.57367 | 8.76044 | 7.42787 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.6718 | 10.4214 | 9.99575 | 12.0941 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.61578 | 8.23275 | 5.6812 | 8.79104 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.60986 | 9.68115 | 11.9336 | 29.8592 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.65644 | 7.21055 | 6.49929 | 6.82813 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.07693 | 3.52831 | 4.28165 | 9.512 |
CDS Structure of MLOC_18933
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18933.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g43490.2 |
+3 |
3e-171 |
499 |
308/416 (74%) |
13105.m04581 protein OsFBX169 - F-box domain containing protein, expressed |
| TAIR PP10 |
AT5G46170.1 |
+3 |
6e-125 |
379 |
233/385 (61%) |
F-box family protein | chr5:18715638-18716825 REVERSE LENGTH=395 |