MLOC_18922 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.033641.397911.176251.31818
LEAShoots from the seedlings (10 cm shoot stage)2.014060.7624160.956551.15494
INF1Young developing inflorescences (5mm)3.658663.751523.316523.22045
INF2Developing inflorescences (1-1.5 cm)2.442622.513062.4262.92539
ROORoots from the seedlings (10 cm shoot stage)2.532951.996681.678582.83888
NODDeveloping tillers at six leaf stage, 3rd internode5.663026.848314.045430.8173
CAR5Developing grain, bracts removed (5 DPA)1.214731.230121.05891.27828
CAR15Developing grain, bracts removed (15 DPA)1.686391.790811.078823.84151



CDS Structure of MLOC_18922






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18922.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368030NoneNoneNoneNone
MLOC_18922.3CUST_146_PI427708083AvailableAvailablecontig_1582663 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g45250.2 -3 3e-92 315 198/308 (64%) 13111.m04518 protein ribonucleases P/MRP protein subunit POP1 containing protein, expressed
TAIR PP10 AT2G47300.3 -3 3e-42 166 121/304 (40%) ribonuclease Ps | chr2:19419333-19422076 FORWARD LENGTH=659