MLOC_1886 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.08595 | 4.11302 | 4.77408 | 3.28479 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.26355 | 1.40696 | 2.68563 | 2.32178 |
INF1 | Young developing inflorescences (5mm) | 6.44656 | 7.61572 | 9.24972 | 5.62687 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.0255 | 12.1891 | 11.4258 | 11.6729 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.12597 | 4.13324 | 3.36847 | 4.05873 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.46791 | 7.308 | 5.74839 | 20.9188 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.62527 | 7.1472 | 5.51291 | 5.59861 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.14284 | 2.36124 | 3.10001 | 5.97555 |
CDS Structure of MLOC_1886
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1886.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g63710.2 |
+3 |
2e-67 |
219 |
112/148 (76%) |
13103.m07066 protein GTPase-activating protein, putative, expressed |
TAIR PP10 |
AT4G17890.2 |
+3 |
3e-54 |
184 |
87/123 (71%) |
| Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-9938988 FORWARD LENGTH=384 |