- Predicted Gene MLOC_18827
MLOC_18827 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.3195 | 19.389 | 18.0347 | 25.7643 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.488 | 9.16144 | 10.1827 | 12.325 |
| INF1 | Young developing inflorescences (5mm) | 42.2815 | 43.0068 | 47.0454 | 47.7187 |
| INF2 | Developing inflorescences (1-1.5 cm) | 42.1342 | 39.9503 | 39.4769 | 58.9339 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.0325 | 17.9423 | 19.666 | 35.4054 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.64695 | 3.28794 | 8.39438 | 21.1316 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.4591 | 29.1626 | 29.2347 | 40.226 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.2104 | 19.9404 | 17.4792 | 57.3859 |
CDS Structure of MLOC_18827
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18827.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g48422.1 |
+2 |
3e-125 |
383 |
258/381 (68%) |
13105.m05151 protein 60S ribosomal protein-related, putative, expressed |
| TAIR PP10 |
AT3G58660.1 |
+2 |
2e-49 |
180 |
132/339 (39%) |
Ribosomal protein L1p/L10e family | chr3:21701574-21702914 FORWARD LENGTH=446 |