MLOC_18813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9435415.526712.824614.7315
LEAShoots from the seedlings (10 cm shoot stage)6.279090.8951251.321852.40294
INF1Young developing inflorescences (5mm)29.654631.25928.463627.0496
INF2Developing inflorescences (1-1.5 cm)27.361635.370326.092636.3446
ROORoots from the seedlings (10 cm shoot stage)3.483898.326846.791069.68674
NODDeveloping tillers at six leaf stage, 3rd internode1.898662.351671.725077.26215
CAR5Developing grain, bracts removed (5 DPA)18.249118.036616.740419.0664
CAR15Developing grain, bracts removed (15 DPA)1.648021.638872.238764.60042



CDS Structure of MLOC_18813






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18813.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18813.1CUST_9720_PI427708080AvailableAvailablecontig_1582086 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g08790.1 +3 0.0 1013 581/733 (79%) 13106.m00925 protein ORC1 - Putative origin recognition complex subunit 1, expressed
TAIR PP10 AT4G14700.1 +3 0.0 699 385/620 (62%) | Symbols: ATORC1A, ORC1A | origin recognition complex 1 | chr4:8422236-8424665 FORWARD LENGTH=809