MLOC_1881 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2881180.4745390.7495090
LEAShoots from the seedlings (10 cm shoot stage)1.744742.256671.867580
INF1Young developing inflorescences (5mm)0.4703891.195022.397230
INF2Developing inflorescences (1-1.5 cm)1.110172.206310.495810
ROORoots from the seedlings (10 cm shoot stage)0.9388530.2457640.8096890
NODDeveloping tillers at six leaf stage, 3rd internode1.263142.979655.682410
CAR5Developing grain, bracts removed (5 DPA)01.049621.025380
CAR15Developing grain, bracts removed (15 DPA)0.480083000



CDS Structure of MLOC_1881






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK353595
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353595NoneNoneNoneNone
MLOC_1881.1NoneAvailableNonecontig_116773 (Not mapped)
MLOC_30565.1NoneAvailableNonecontig_2109607 (Mapped)
MLOC_30738.1NoneAvailableNonecontig_212252 (Mapped)
MLOC_31233.1NoneAvailableNonecontig_216934 (Not mapped)
MLOC_3306.1NoneAvailableAvailablecontig_129575 (Mapped)
MLOC_42842.1NoneAvailableNonecontig_266545 (Not mapped)
MLOC_50496.1NoneAvailableNonecontig_36088 (Not mapped)
MLOC_63520.1NoneAvailableNonecontig_476630 (Not mapped)
MLOC_74795.1NoneAvailableNonecontig_665421 (Not mapped)
MLOC_9253.1NoneAvailableNonecontig_150545 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----