- Predicted Gene MLOC_18785
MLOC_18785 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.238292 | 0.131643 | 0.0689842 | 0.152876 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.1693 | 34.6768 | 4.00336 | 11.9652 |
| INF1 | Young developing inflorescences (5mm) | 0.04003 | 0.0703849 | 0.0505274 | 0.0537923 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0636865 | 0.0609264 | 0 | 0.0959488 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.6445 | 4.04565 | 1.81819 | 6.26022 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.857547 | 1.74438 | 3.55328 | 6.18856 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 109.895 | 127.727 | 111.731 | 131.641 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.5827 | 15.3618 | 11.3214 | 34.8026 |
CDS Structure of MLOC_18785
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18785.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g42130.1 |
-1 |
0.0 |
563 |
291/351 (83%) |
13103.m04534 protein gibberellin 20 oxidase 2, putative, expressed |
| TAIR PP10 |
AT3G19000.1 |
-1 |
1e-117 |
355 |
183/350 (52%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:6553668-6554987 REVERSE LENGTH=352 |