MLOC_18785 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2382920.1316430.06898420.152876
LEAShoots from the seedlings (10 cm shoot stage)1.169334.67684.0033611.9652
INF1Young developing inflorescences (5mm)0.040030.07038490.05052740.0537923
INF2Developing inflorescences (1-1.5 cm)0.06368650.060926400.0959488
ROORoots from the seedlings (10 cm shoot stage)19.64454.045651.818196.26022
NODDeveloping tillers at six leaf stage, 3rd internode0.8575471.744383.553286.18856
CAR5Developing grain, bracts removed (5 DPA)109.895127.727111.731131.641
CAR15Developing grain, bracts removed (15 DPA)10.582715.361811.321434.8026



CDS Structure of MLOC_18785






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18785.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373503NoneNoneNoneNone
MLOC_18785.1CUST_1806_PI427708080AvailableAvailablecontig_1582000 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42130.1 -1 0.0 563 291/351 (83%) 13103.m04534 protein gibberellin 20 oxidase 2, putative, expressed
TAIR PP10 AT3G19000.1 -1 1e-117 355 183/350 (52%) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:6553668-6554987 REVERSE LENGTH=352