- Predicted Gene MLOC_18720
MLOC_18720 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18720_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18720_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.0216 | 20.4189 | 17.2422 | 15.7934 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3503 | 11.4078 | 6.19193 | 7.636 |
INF1 | Young developing inflorescences (5mm) | 41.5068 | 40.9612 | 36.6339 | 30.7817 |
INF2 | Developing inflorescences (1-1.5 cm) | 42.0534 | 36.9836 | 32.6074 | 38.625 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.43266 | 13.2343 | 10.2685 | 13.524 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.75495 | 1.89528 | 5.74687 | 7.7355 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.1767 | 18.5778 | 20.1751 | 17.0827 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.86885 | 8.34124 | 7.00169 | 17.3469 |
CDS Structure of MLOC_18720
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18720.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g12160.1 |
+1 |
4e-145 |
442 |
231/284 (81%) |
13106.m01321 protein AAA-type ATPase family protein, putative, expressed |
TAIR PP10 |
AT1G50140.1 |
+1 |
2e-80 |
269 |
140/292 (48%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:18569921-18578663 REVERSE LENGTH=1003 |