MLOC_18714 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.850847.606843.803947.6675
LEAShoots from the seedlings (10 cm shoot stage)42.508616.923720.09324.5271
INF1Young developing inflorescences (5mm)75.623466.62962.927160.1864
INF2Developing inflorescences (1-1.5 cm)47.532661.738154.362.9634
ROORoots from the seedlings (10 cm shoot stage)18.337829.502826.938536.8195
NODDeveloping tillers at six leaf stage, 3rd internode12.459413.572616.89451.4327
CAR5Developing grain, bracts removed (5 DPA)55.646655.061354.214955.5842
CAR15Developing grain, bracts removed (15 DPA)16.831716.823317.70839.8704



CDS Structure of MLOC_18714






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18714.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367101NoneNoneNoneNone
MLOC_18714.1CUST_1801_PI427708080AvailableAvailablecontig_1581692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16440.1 +2 0.0 1308 647/684 (95%) 13103.m01954 protein outer membrane protein, OMP85 family, putative, expressed
TAIR PP10 AT3G46740.1 +2 0.0 1039 497/684 (73%) | Symbols: TOC75-III, MAR1 | translocon at the outer envelope membrane of chloroplasts 75-III | chr3:17216104-17219296 REVERSE LENGTH=818