MLOC_18689 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.480937.694343.67537.3896
LEAShoots from the seedlings (10 cm shoot stage)60.096169.728585.210755.5221
INF1Young developing inflorescences (5mm)20.238423.641420.787718.4397
INF2Developing inflorescences (1-1.5 cm)19.877419.249120.18621.6807
ROORoots from the seedlings (10 cm shoot stage)92.456365.521970.883176.0326
NODDeveloping tillers at six leaf stage, 3rd internode71.595780.917341.7067193.293
CAR5Developing grain, bracts removed (5 DPA)59.30156.335265.566559.8558
CAR15Developing grain, bracts removed (15 DPA)28.300526.197126.004364.4311



CDS Structure of MLOC_18689






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18689.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18689.2NoneAvailableAvailablecontig_1581567 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61130.1 -3 0.0 565 285/311 (92%) 13103.m06718 protein phosphoesterase family protein, putative, expressed
TAIR PP10 AT1G07230.1 -3 2e-161 473 236/313 (75%) | Symbols: NPC1 | non-specific phospholipase C1 | chr1:2220509-2222778 REVERSE LENGTH=533