MLOC_18665 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.339424.740327.230917.6063
LEAShoots from the seedlings (10 cm shoot stage)146.3842.374252.668259.5366
INF1Young developing inflorescences (5mm)17.796519.075717.252510.6435
INF2Developing inflorescences (1-1.5 cm)40.882439.256846.019333.255
ROORoots from the seedlings (10 cm shoot stage)161.34753.500752.287366.8709
NODDeveloping tillers at six leaf stage, 3rd internode24.877135.929115.028886.3431
CAR5Developing grain, bracts removed (5 DPA)111.03981.995860.040359.5477
CAR15Developing grain, bracts removed (15 DPA)31.663532.770929.702449.8342



CDS Structure of MLOC_18665






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18665.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18665.1CUST_11586_PI427708083AvailableAvailablecontig_1581454 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g39140.4 -1 4e-82 268 133/142 (94%) 13108.m04169 protein heat shock protein, putative, expressed
TAIR PP10 AT5G56010.1 -1 4e-77 259 127/145 (88%) | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 | heat shock protein 81-3 | chr5:22681410-22683911 FORWARD LENGTH=699