MLOC_18664 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains146.844106.391113.132141.742
LEAShoots from the seedlings (10 cm shoot stage)641.078175.236193.839321.585
INF1Young developing inflorescences (5mm)75.124284.448279.609180.5591
INF2Developing inflorescences (1-1.5 cm)207.411216.778234.194285.887
ROORoots from the seedlings (10 cm shoot stage)666.969236.649222.765439.988
NODDeveloping tillers at six leaf stage, 3rd internode95.7926187.31650.8137670.101
CAR5Developing grain, bracts removed (5 DPA)446.618351.213269.949425.521
CAR15Developing grain, bracts removed (15 DPA)128.162143.693116.648347.375



CDS Structure of MLOC_18664






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18664.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356688NoneNoneNoneNone
MLOC_18664.3CUST_1798_PI427708080AvailableAvailablecontig_1581454 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g39140.3 -3 0.0 716 383/404 (95%) 13108.m04168 protein heat shock protein, putative, expressed
TAIR PP10 AT5G56010.1 -3 0.0 699 372/404 (92%) | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 | heat shock protein 81-3 | chr5:22681410-22683911 FORWARD LENGTH=699