MLOC_18641 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.09119.6339411.79247.82238
LEAShoots from the seedlings (10 cm shoot stage)12.41418.227099.49796.72666
INF1Young developing inflorescences (5mm)25.85425.422831.475215.5904
INF2Developing inflorescences (1-1.5 cm)25.107621.910125.620319.5164
ROORoots from the seedlings (10 cm shoot stage)19.599511.509212.250311.9644
NODDeveloping tillers at six leaf stage, 3rd internode9.256446.6062113.325819.4179
CAR5Developing grain, bracts removed (5 DPA)7.518965.923417.601974.81123
CAR15Developing grain, bracts removed (15 DPA)4.104483.519226.044146.58153



CDS Structure of MLOC_18641






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18641.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18641.1NoneAvailableAvailablecontig_1581335 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g16640.1 -1 1e-42 155 81/105 (77%) 13102.m01863 protein proline-rich protein HaeIII subfamily 1 precursor, putative, expressed
TAIR PP10 AT4G03120.1 -1 7e-27 110 62/104 (60%) C2H2 and C2HC zinc fingers superfamily protein | chr4:1385747-1387331 FORWARD LENGTH=207