MLOC_18638 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.374211.978063.254122.79171
LEAShoots from the seedlings (10 cm shoot stage)2.685070.8048781.879241.54845
INF1Young developing inflorescences (5mm)5.801574.575275.493394.05142
INF2Developing inflorescences (1-1.5 cm)6.248856.54476.098956.4198
ROORoots from the seedlings (10 cm shoot stage)2.100632.105522.478932.45807
NODDeveloping tillers at six leaf stage, 3rd internode2.610013.352293.5327410.7127
CAR5Developing grain, bracts removed (5 DPA)2.828023.516153.315792.88807
CAR15Developing grain, bracts removed (15 DPA)0.4485670.8477611.220531.51884



CDS Structure of MLOC_18638






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18638.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18638.1CUST_11584_PI427708083AvailableAvailablecontig_1581324 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05190.1 -2 4e-21 96 49/75 (65%) 13106.m00500 protein BRCA1 C Terminus domain containing protein, expressed
TAIR PP10None-----