- Predicted Gene MLOC_18603
MLOC_18603 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.32997 | 8.36969 | 9.81804 | 6.4665 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.78411 | 3.13472 | 3.09418 | 2.42177 |
INF1 | Young developing inflorescences (5mm) | 4.00125 | 5.34665 | 6.512 | 2.99697 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.29365 | 4.43728 | 4.7708 | 3.54054 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.86216 | 4.51756 | 7.21731 | 3.9254 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.1699 | 6.51249 | 5.47588 | 15.3238 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.28746 | 3.47606 | 3.87679 | 2.58815 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.19974 | 1.02913 | 1.59477 | 2.04906 |
CDS Structure of MLOC_18603
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18603.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g05080.1 |
+1 |
2e-20 |
91 |
44/46 (96%) |
13106.m00478 protein cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT1G80230.1 |
+1 |
5e-11 |
62 |
34/54 (63%) |
Rubredoxin-like superfamily protein | chr1:30169784-30170999 REVERSE LENGTH=171 |