MLOC_18560 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.067460.05822580.6748830.632415
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.908791.101811.67672.21572
NODDeveloping tillers at six leaf stage, 3rd internode0004.28378
CAR5Developing grain, bracts removed (5 DPA)2.133723.205852.394552.68553
CAR15Developing grain, bracts removed (15 DPA)00.036337100.0458802



CDS Structure of MLOC_18560






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18560.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375689NoneNoneNoneNone
MLOC_18560.1CUST_1790_PI427708080AvailableAvailablecontig_158102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g09270.1 -1 2e-102 316 158/207 (76%) 13106.m00991 protein hypro1, putative, expressed
TAIR PP10 AT5G57500.1 -1 2e-46 167 88/213 (41%) Galactosyltransferase family protein | chr5:23286406-23287525 REVERSE LENGTH=318