- Predicted Gene MLOC_18560
MLOC_18560 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18560_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18560_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.06746 | 0.0582258 | 0.674883 | 0.632415 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.90879 | 1.10181 | 1.6767 | 2.21572 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 4.28378 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.13372 | 3.20585 | 2.39455 | 2.68553 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0363371 | 0 | 0.0458802 |
CDS Structure of MLOC_18560
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18560.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g09270.1 |
-1 |
2e-102 |
316 |
158/207 (76%) |
13106.m00991 protein hypro1, putative, expressed |
TAIR PP10 |
AT5G57500.1 |
-1 |
2e-46 |
167 |
88/213 (41%) |
Galactosyltransferase family protein | chr5:23286406-23287525 REVERSE LENGTH=318 |