- Predicted Gene MLOC_18559
MLOC_18559 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18559_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18559_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.1582 | 8.69968 | 7.91438 | 7.02014 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.4847 | 17.2394 | 14.0807 | 12.6562 |
INF1 | Young developing inflorescences (5mm) | 9.49015 | 9.98725 | 10.3333 | 8.03452 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.4696 | 14.5762 | 11.8295 | 13.9241 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.20688 | 7.73528 | 4.78569 | 7.85384 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.73946 | 12.9508 | 9.79845 | 36.6799 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.2317 | 14.6943 | 14.9712 | 13.9277 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.9021 | 13.3658 | 12.2555 | 27.2504 |
CDS Structure of MLOC_18559
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18559.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g46950.1 |
+3 |
0.0 |
754 |
426/672 (63%) |
13103.m05055 protein DNA binding protein, putative, expressed |
TAIR PP10 |
AT1G64570.1 |
+3 |
2e-155 |
516 |
402/1120 (36%) |
| Symbols: DUO3 | Homeodomain-like superfamily protein | chr1:23978868-23983925 FORWARD LENGTH=1239 |