MLOC_18559 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.15828.699687.914387.02014
LEAShoots from the seedlings (10 cm shoot stage)14.484717.239414.080712.6562
INF1Young developing inflorescences (5mm)9.490159.9872510.33338.03452
INF2Developing inflorescences (1-1.5 cm)12.469614.576211.829513.9241
ROORoots from the seedlings (10 cm shoot stage)4.206887.735284.785697.85384
NODDeveloping tillers at six leaf stage, 3rd internode8.7394612.95089.7984536.6799
CAR5Developing grain, bracts removed (5 DPA)15.231714.694314.971213.9277
CAR15Developing grain, bracts removed (15 DPA)11.902113.365812.255527.2504



CDS Structure of MLOC_18559






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18559.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18559.1CUST_9700_PI427708080AvailableAvailablecontig_158102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g46950.1 +3 0.0 754 426/672 (63%) 13103.m05055 protein DNA binding protein, putative, expressed
TAIR PP10 AT1G64570.1 +3 2e-155 516 402/1120 (36%) | Symbols: DUO3 | Homeodomain-like superfamily protein | chr1:23978868-23983925 FORWARD LENGTH=1239