MLOC_18540 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.520919.038515.217917.3246
LEAShoots from the seedlings (10 cm shoot stage)37.909951.611175.018746.0614
INF1Young developing inflorescences (5mm)11.129310.678611.77749.84062
INF2Developing inflorescences (1-1.5 cm)15.68169.6721913.228914.1875
ROORoots from the seedlings (10 cm shoot stage)26.09340.763542.00746.8243
NODDeveloping tillers at six leaf stage, 3rd internode93.586329.88978.1468114.831
CAR5Developing grain, bracts removed (5 DPA)8.902929.2172110.07819.52329
CAR15Developing grain, bracts removed (15 DPA)2.280933.623273.69917.54146



CDS Structure of MLOC_18540






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18540.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18540.1CUST_11580_PI427708083AvailableAvailablecontig_1580929 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g53730.1 -2 5e-16 75 46/79 (58%) 13101.m05631 protein expressed protein
TAIR PP10None-----