- Predicted Gene MLOC_18525
MLOC_18525 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 31.8333 | 35.7442 | 32.8066 | 38.4307 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 171.523 | 210.501 | 205.188 | 179.161 |
| INF1 | Young developing inflorescences (5mm) | 15.99 | 21.4752 | 29.8148 | 20.238 |
| INF2 | Developing inflorescences (1-1.5 cm) | 82.3952 | 55.7458 | 69.8506 | 78.2405 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 125.186 | 77.3228 | 93.4161 | 114.587 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 102.075 | 180.936 | 67.0811 | 494.159 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 44.3103 | 36.3508 | 18.2628 | 34.7991 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 49.56 | 41.973 | 43.7888 | 111.941 |
CDS Structure of MLOC_18525
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18525.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g15890.2 |
-3 |
3e-40 |
150 |
73/82 (89%) |
13103.m01871 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT1G07350.2 |
-3 |
4e-32 |
120 |
55/80 (69%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2258816-2259586 REVERSE LENGTH=129 |
